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    Home / Central Data Catalog / TASP / ANRS12249TASP
tasp

Treatment as Prevention ANRS 12249

South Africa, 2012 - 2016
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Reference ID
ANRS12249TasP
Producer(s)
Dabis, François, Newell, Marie-Louise, Pillay, Deenan
Collections
TasP ANRS 12249
Metadata
Documentation in PDF DDI/XML JSON
Created on
Jan 30, 2018
Last modified
Jan 30, 2018
Page views
394627
Downloads
4610
  • Study Description
  • Data Dictionary
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  • Data files
  • HIV Drug
    Treatments
  • Households
  • CHEs
  • Lab Test
    Results
  • ARTemis Lab
    Results
  • ARTemis
    Patients
  • CHE Adverse
    Events
  • SCBs SCCs
  • CHE Action
    Plans
  • Clusters
  • Visits
  • HHIs
  • CFUs
  • CFU Pill Tests
  • Local Areas
  • Census Rounds
  • SCIs
  • Individual
    Consents
  • SAEs Initial
    Notifications
  • SAEs Initial
    Notifications -
    Events details
  • SAEs Initial
    Notifications -
    Medications
  • SAEs
    Complementary
    Notifications
  • SAEs
    Complementary
    Notifications -
    Medications
  • CBCs
  • Specimens
  • IQs
  • Minority
    Variants
  • BMQ Surveys
  • NGS Genomics
  • Refusals
  • NgsAssembQuality
  • Sample Genomics
  • Locations
  • LinkToCareTracker
  • Exits
  • ACCDB
    Encounters
  • ACCDB Encounter
    Therapies
  • Individuals
  • Trial Statuses
  • DBS results
Variable Groups
  • Identifiers
    • ClusterId
    • LocationId
    • HouseholdId
    • IndividualId
    • VisitId
    • CVIntId
    • StaffMemberId
    • AdvEventEpisodeId
    • DocumentId
    • SAEIntId
    • CensusRoundId
    • LocalAreaCode
    • SpecimenId

Data file: Minority Variants

Dataset contains multiple rows per individual sequence analysed with the Next Generation Sequencing method and include information about drug resistance minority variants

Cases: 8594
Variables: 11

Variables

IndividualId
Unique anonymised individual identifier
SpecimenId
Unique anonymised specimen identifier
SequenceDate
Date on which the specimen was sequenced
Name
Name
Max
Max
AminoAcidChange
The amino acid change
Change
The change
CodonChange
The condon change
Coverage
The coverage
PolymorphismType
The polymorphism yype
VariantFrequency
The variant frequency
Total: 11
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