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Congenital and postnatal CMV infection in the era of WHO PMTCT Option B+ in rural South Africa

South Africa, 2016 - 2019
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Reference ID
AHRI.CMV.2022.v2
Producer(s)
Prof Deenan Pillay, Suresh B. Boppana, Karen Fowler, Prakash Jeena, Benn Sartorius, Nigel Klein, Olivier Koole
Metadata
Documentation in PDF DDI/XML JSON
Created on
Jul 01, 2022
Last modified
Jul 01, 2022
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38032
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Data file: AHRI.CMV.2022.v2

Cases: 2872
Variables: 329

Variables

autocmv_1
Auto number CMV study
redcap_event_name
Event Name
site_1a
Site
sample_stored
Do you agree for your sample to be stored for future research ?
consent_date1
Date/time (signed informed consent)
mother_dob1
Mothers Date of birth
mother_age1
Age of mother (years)
edu1
Highest level of education
emp1
Employment
nr_rooms1
Number of rooms in household
nr_people1
Number of people in household
nr_salary1
Number of people in the household earning a monthly salary
other_children1
Other children (15 years) in the household
nr_other_children1
Number of other children (< 15 years) in household
age1_of_child1
Age of youngest child (years)
age1_of_child2
Age of 2nd youngest child (years)
age1_of_child3
Age of 3rd youngest child (years)
age1_of_child4
Age of 4th youngest child (years)
age1_of_child5
Age of 5th youngest child (years)
age1_of_child6
Age of 6th youngest child (years)
age1_of_child7
Age of 7th youngest child (years)
age1_of_child8
Age of 8th youngest child (years)
preschool_contact1___0
Close contact with preschool children during pregnancy (choice=None)
preschool_contact1___1
Close contact with preschool children during pregnancy (choice=Work with childre
preschool_contact1___2
Close contact with preschool children during pregnancy (choice=Household contact
preschool_contact1___3
Close contact with preschool children during pregnancy (choice=Nappy changes)
preschool_contact1___4
Close contact with preschool children during pregnancy (choice=Nose-wiping)
preschool_contact1___5
Close contact with preschool children during pregnancy (choice=Feeding children)
preschool_contact1___6
Close contact with preschool children during pregnancy (choice=Other)
cigarettes_tobacco1
Use of cigarettes / tobacco
cigarettes_packs1
Number of packs per day
years_smoking1
Number of years
alcohol1
Use of alcohol
drinks_week1
Number of drinks per week
pregnancy_febrileillness1
Febrile illness during current pregnancy?
hypertension1
Hypertension
diabetes1
Diabetes
tuberculosis1
Tuberculosis
illness_other1
Other
pregnancy_complic1
Complications during current pregnancy
hiv_status1
HIV status
art1
On ART
artstart_preg1
Started ART during pregnancy
art_start_year1
Year started ART
art_start_month1
Month started ART
current_art_regimen1
Current ART regimen
changed_art_regimen1
Changed ART regimen since start ART
delivery_date1
Date/time delivery
gravity1
Gravity
parity1
Parity
gestation_wks1
Gestation (weeks)
pregnancy_nr
Type of pregnancy
delivery_mode1
Mode of delivery
case_report_form_1_s_v_0
Complete?
site_1b
Site
validation1
Validation check
multiplepreg1
Infant part of multiple pregnancy (two or more babies)?
first_born1
First born
second_born2
Second born
third_born3
Third born
birthweight1
Birth Weight (kg)
birthlength1
Birth Length (cm)
gender1
Gender
apgar11
APGAR score (/10) after 1 minute
apgar_score_10_after_5_min
APGAR score (/10) after 5 minutes
headcircumference1
Head circumference (cm)
congenital_infection1___0
Signs of congenital CMV infection (choice=None)
congenital_infection1___1
Signs of congenital CMV infection (choice=Small for gestational age)
congenital_infection1___2
Signs of congenital CMV infection (choice=Hepatomegaly)
congenital_infection1___3
Signs of congenital CMV infection (choice=Jaundice)
congenital_infection1___4
Signs of congenital CMV infection (choice=Petechiae / Purpura)
congenital_infection1___5
Signs of congenital CMV infection (choice=Seizures)
congenital_infection1___6
Signs of congenital CMV infection (choice=Cardiac murmur)
congenital_infection1___7
Signs of congenital CMV infection (choice=Cataracts)
congenital_infection1___8
Signs of congenital CMV infection (choice=Microcephaly)
saliva_done1
Saliva specimen obtained?
saliva_result1
Result CMV PCR Saliva
case_report_form_1_s_v_1
Complete?
site_2a
Site
mother_dob2
Mothers Date of birth
infant_dob2
Infants Date of birth
visit_date2
Date visit
ic_ccmv2
Informed consent signed for congenital CMV study
saliva_date2
Date (first) saliva specimen taken
saliva_pos2
Saliva PCR CMV result at birth
saliva_posrec2
Date (first) positive result received by research assistant
contact_date2
Date contacted by research assistant
admitted_afterbirth2
Admitted after birth
admitted_nrdays2
Number of days admitted
admitted_rsn2
Reason for admission
cmv_enrolevidence2
Evidence of CMV disease
weight2
Weight (kg)
length2
Length/height (cm)
headcircumference2
Head circumference (cm)
clinexam2
Abnormalities on clinical examination
managementplan_paed2
Management plan paediatrics
screeningoae_perf2
Screening OAE performed
rsn_noscreeningoae2
Reason?
datetime_scoae2
Date/time Screening OAE
result_scteoae_rt2
Result screening Quick TEOAE right
result_scoae_lft2
Result screening Quick TEOAE left
result_scqdpoae_rt2
Result screening QDP55 right
result_scqdpoae_lft2
Result screening QDP55 left
otoscopy_perf2
Otoscopy performed
rsn_nootoscopy2
Reason?
datetime_otosocpy2
Date/time otosocpy
results_otosocopy_rt2
Results otosocopy right side
results_otoscopy_lft2
Results otoscopy left side
tympanometry_perf2
Tympanometry performed
rsn_notymp2
Reason?
datetime_tympanometry2
Date/time tympanometry
results_tympanometry_rt2
Results tympanometry right
results_tympanometry_lft2
Results tympanometry left
diagnosticoae_perf2
Diagnostic OAE performed
rsn_nodiagnosticoae2
Reason?
datetime_oaedg2
Date/time diagnostic OAE
result_diagnosticteoae_rt2
Result diagnostic Quick TEOAE right
result_diagnosticoae_lft2
Result diagnostic Quick TEOAE left
result_diagnosticqdpoae_rt2
Result diagnostic QDP55 right
result_diagnosticqdpoae_lft2
Result diagnostic QDP55 left
managementplan_audio2
Management plan audiology
audio_code2
Code of the person performing the audiology
saliva_done2
Saliva specimen (repeat) obtained?
saliva_result2
Result (repeat) saliva specimen
urine_done2
Urine sample obtained?
urine_result2
Result urine specimen
dbs_birth_sent2a
Was DBS taken at birth (only if applicable - HIV exposed babies)?
dbs_birth_result2a
Result DBS (PCR HIV) specimen at birth (if applicable)
appointment2
Next appointment date
staff_code2
Name interviewer
case_report_form_2_c_v_2
Complete?
infant_dob23
Infants Date of birth
withdraw_rsn23
Reason for missed visit
death_dateyn23
Date of death known
death_dateexact23
Date of death
death_yr23
Year of death
death_m23
Month of death
death_d23
Day of death
admitted_afterbirth23
Admitted in hospital (after birth)
dbs_birth_result23
PCR HIV result (for HIV exposed infants)
infosource23
Source of info for missed visit
exit_form_2_cohort_c_v_3
Complete?
site_2b
Site
mother_dob2_v2
Mothers Date of birth
infant_dob2_v2
Infants Date of birth
visit_date2_v2
Date visit
type_visit2_v2
Type of study visit
ic_ccmv2_v2
Informed consent signed for congenital CMV study
saliva_date2_v2
Date (first) saliva specimen taken
saliva_pos2_v2
Saliva PCR CMV result at birth
saliva_date2_v22_9a5
Date (second/confirmatory) saliva specimen taken
saliva_pos2_v22_55d
Saliva PCR CMV result (second/confirmatory sample)
admitted_afterbirth2_v2
Admitted after birth
admitted_nrdays2_v2
Number of days admitted
admitted_rsn2_v2
Reason for admission
visit_afterbirth2_v2
Visit to hospital/clinic since birth
cmv_enrolevidence2_v2
Evidence of CMV disease
healthproblem_lastvisit2_v2
Health problems since last visit
visit_lastvisit2_v2
Visit to hospital/clinic
cmv_fuevidence2_v2
Evidence of CMV disease
weight2_v2
Weight (kg)
length2_v2
Length/height (cm)
headcircumference2_v2
Head circumference (cm)
clinexam2_v2
Abnormalities on clinical examination
visit_age2_v2
Infants age (weeks)
startcooing2_v2
Starting to make cooing sounds
startsmile2_v2
Starting to smile
briefeyecontact2_v2
Brief eye contact
startfollow2_v2
Starting to follow with eyes
eyesmovetogether2_v2
Eyes are moving together
startheadcontrol2_v2
Starting to control head
limbssymm2_v2
Moving limbs symmetrically
cooing2_v2
Cooing
startbabble2_v2
Starting to babble
socialsmiling2_v2
Social smiling
prolongedeyecontact2_v2
Prolonged eye contact
reactstoloudsounds2_v2
Reacts to loud sounds
followobjects2_v2
Can follow/track objects with eyes
handsmidline2_v2
Can bring hands to mid line and to the mouth
liftingknees2_v2
Lifts knees
graspsobjects2_v2
Grasps objects
liftsheadprone2_v2
Lifts head when lying prone
convbabble2_v2
Conversational babble
fewwords2_v2
Says a few words, like mama
strangeranxiety2_v2
Stranger anxiety
wavesbyebye2_v2
Waves bye bye
standsupported2_v2
Can stand supported
crawling2_v2
Crawling
graspsfingerthumb2_v2
Grasps with finger and thumb
pointing2_v2
Pointing
managementplan_paed2_v2
Management plan paediatrics
screeningoae_perf2_v2
Screening OAE performed
rsn_noscreeningoae2_v2
Reason?
datetime_scoae2_v2
Date/time Screening OAE
result_scteoae_rt2_v2
Result screening Quick TEOAE right
result_scoae_lft2_v2
Result screening Quick TEOAE left
result_scqdpoae_rt2_v2
Result screening QDP55 right
result_scqdpoae_lft2_v2
Result screening QDP55 left
otoscopy_perf2_v2
Otoscopy performed
rsn_nootoscopy2_v2
Reason?
datetime_otosocpy2_v2
Date/time otosocpy
results_otosocopy_rt2_v2
Results otosocopy right side
results_otoscopy_lft2_v2
Results otoscopy left side
tympanometry_perf2_v2
Tympanometry performed
rsn_notymp2_v2
Reason?
datetime_tympanometry2_v2
Date/time tympanometry
results_tympanometry_rt2_v2
Results tympanometry right
results_tympanometry_lft2_v2
Results tympanometry left
diagnosticoae_perf2_v2
Diagnostic OAE performed
rsn_nodiagnosticoae2_v2
Reason?
datetime_oaedg2_v2
Date/time diagnostic OAE
result_diagnosticteoae_rt2_v2
Result diagnostic Quick TEOAE right
result_diagnosticoae_lft2_v2
Result diagnostic Quick TEOAE left
result_diagnosticqdpoae_rt2_v2
Result diagnostic QDP55 right
result_diagnosticqdp_v_4
Result diagnostic QDP55 left
managementplan_audio2_v2
Management plan audiology
audio_code2_v2
Code of the person performing the audiology
saliva_done2_v2
Saliva specimen obtained?
saliva_result2_v2
Result (follow-up) saliva specimen
urine_done2_v2
Urine sample obtained?
urine_result2_v2
Result urine specimen
dbs_birth_sent2b
Was a DBS taken at birth (only if applicable - HIV exposed babies)?
dbs_birth_result2b
Result DBS at birth
dbs_sent_10wks2
Was a DBS taken at 10 weeks (only if applicable - HIV exposed babies)?
dbs_result2_v2
Result DBS (PCR HIV) specimen
staff_code2_v2
Name interviewer
case_report_form_2_c_v_5
Complete?
site_3a
Site
barcode_mother30
Study ID Mother
mother_dob3
Mothers Date of birth
emp3
Employment
nr_rooms3
Number of rooms in household
nr_people3
Number of people in household
nr_salary3
Number of people in the household earning a monthly salary
other_children3
Other children (< 15 years) in the household
nr_other_children3
Number of other children (< 15 years) in household
age3_of_child1
Age of youngest child (years)
age3_of_child2
Age of 2nd youngest child (years)
age3_of_child3
Age of 3rd youngest child (years)
age3_of_child4
Age of 4th youngest child (years)
age3_of_child5
Age of 5th youngest child (years)
age3_of_child6
Age of 6th youngest child (years)
age3_of_child7
Age of 7th youngest child (years)
age3_of_child8
Age of 8th youngest child (years)
childcare3
Childcare being given to the infant
staff_code3m
Name interviewer
case_report_form_3_p_v_6
Complete?
site_3b
Site
barcode_mother31
Study Id mother
barcode_infant3
Infant Study Number
visit_date3
Date visit
infant_dob3
Infants Date of birth
type_visit3
Type of study visit
ic_pcmv3
Informed consent signed for postnatal CMV study
admitted_afterbirth3
Admitted after birth
admitted_nrdays3
Number of days admitted
admitted_rsn3
Reason for admission
visit_afterbirth3
Visit to hospital/clinic since birth
cmv_enrolevidence3
Evidence of CMV disease
healthproblem_lastvisit3
Health problems since last visit
visit_lastvisit3
Visit to hospital/clinic
cmv_fuevidence3
Evidence of CMV disease
infantfeeding3
Infant feeding since last visit
weight3
Weight (kg)
length3
Length/height (cm)
headcircumference3
Head circumference (cm)
clinexam3
Abnormalities on clinical examination
visit_age3
Infants age
startcooing3
Starting to make cooing sounds
startsmile3
Starting to smile
briefeyecontact3
Brief eye contact
startfollow3
Starting to follow with eyes
eyesmovetogether3
Eyes are moving together
startheadcontrol3
Starting to control head
limbssymm3
Moving limbs symmetrically
cooing3
Cooing
startbabble3
Starting to babble
socialsmiling3
Social smiling
prolongedeyecontact3
Prolonged eye contact
reactstoloudsounds3
Reacts to loud sounds
followobjects3
Can follow/track objects with eyes
handsmidline3
Can bring hands to mid line and to the mouth
liftingknees3
Lifts knees
graspsobjects3
Grasps objects
liftsheadprone3
Lifts head when lying prone
convbabble3
Conversational babble
fewwords3
Says a few words, like mama
strangeranxiety3
Stranger anxiety
wavesbyebye3
Waves bye bye
standsupported3
Can stand supported
crawling3
Crawling
graspsfingerthumb3
Grasps with finger and thumb
pointing3
Pointing
managementplan_paed3
Management plan paediatrics
screeningoae_perf3
Screening OAE performed
rsn_noscreeningoae3
Reason?
datetime_scoae3
Date/time Screening OAE
result_scteoae_rt3
Result screening Quick TEOAE right
result_scoae_lft3
Result screening Quick TEOAE left
result_scqdpoae_rt3
Result screening QDP55 right
Total: 329
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