Isisekelo Sempilo:Clinical Management Datasets

South Africa, 2020 - 2022

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AHRI.IsisekeloSempilo.Clinical.Management.Datasets.v2.0

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Dr Maryam, Shahmanesh, ,

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Multilevel HIV Prevention

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Documentation in PDF DDI/XML JSON

Created on

Oct 24, 2022

Last modified

Oct 24, 2022

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Data file: AHRI.IsisekeloSempilo.Clinical.CombinedDataset_Exclu_PInfo.2022.v2

Cases:	2610
Variables:	187

Variables

IIntId

Internal Individual ID

VisitId

Medication Visit Identifier

Instance

Medication Instance

CVDescript

Clinic Visit Description

CVDate

Date of Clinic Visit

ClinicCode

Clinic Location Code

ClinicCodeDesc

Clinic Location Description

CVLocat

Clinic Location Code

CVLocatDesc

Clinic Location Name

CVGPSLat

GPS Latitude

CVGPSLong

GPS Longitude

CRAStaffCode

CRA Staff Code

NurseStaffCode

Nurse Staff Code

ClinicAttended

Was the Clinic attended at this visit?

CVServPrEP

Reason for visiting the Clinic - PrEP Services

CVServART

Reason for visiting the Clinic - ART

CVServContracep

Reason for visiting the Clinic - Contraception

CVServHIVTest

Reason for visiting the Clinic - HIV Testing

CVServSTI

Reason for visiting the Clinic - STI Screening

CVServCervScreen

Reason for visiting the Clinic - Cervical Screening

CVServOth

Reason for visiting the Clinic - Other Non-Medical

CVServOthSpec

Reason for visiting the Clinic - Specify Other Non-Medical Services

Height

Record height (cm)

Weight

Record weight (kg)

BMI

Calculated BMI

AssessCapable

Assessed to be capable to consent for participation

HIV_ConsentDate

Date of informed consent - HIV Testing

ic_hiv_know_status

Consent to Rapid HIV test to know HIV status?

ic_hiv_clinic_attend

Consent to record attendance at clinic?

ic_hiv_sms_contact

Consent to SMS contact?

ic_hiv_phone_contact

Consent to phone call?

hiv_rapid_one_step

HIV Rapid - One step

hiv_rapid_one_step_repeat

HIV Rapid - One step - repeat

hiv_rapid_abon

HIV Rapid - Abon

hiv_rapid_abon_repeat

HIV Rapid - Abon - Repeat

hiv_rapid_final_calculated

HIV Rapid - Final Calculated Result

STISpecimenId

Specimen Identifier - STI

sti_chlamydia_trachomatis

STI - Chlamydia Trachomatis

sti_neisseria_gonorrhoeae

STI - Neisseria Gonorrhoeae

sti_trichomonas_vaginalis

STI - Trichomonas Vaginalis

hepatitis_b_rapid

Hepatitis B - Rapid

creatinine_rapid

Creatinine - Rapid

urine_dipstick_pregnancy

Urine Dipstick Pregnancy

urine_dipstick_pregnancy_repeat

Urine Dipstick Pregnancy - Repeat

glucose_rapid

Glucose - Rapid

glucose_rapid_repeat

Glucose - Rapid - Repeat

syphilis_rapid

Syphilis - Rapid

urinalysis_leukocytes

Urinalysis Leukocytes Result

urinalysis_nitrites

Urinalysis Nitrites Result

urinalysis_urobilinogen

Urinalysis Urobilinogen Result

urinalysis_protein

Urinalysis Protein Result

urinalysis_blood

Urinalysis Blood Result

urinalysis_specific_gravity

Urinalysis Specific Gravity Result

urinalysis_ketone

Urinalysis Ketone Result

urinalysis_bilirubin

Urinalysis Bilirubin Result

urinalysis_glucose

Urinalysis Glucose Result

DBSSpecimenId

Specimen Identifier - DBS

hiv_dbs

HIV DBS Result

viral_load_dbs

Viral Load DBS Result

ElisaSpecimenId

Specimen Identifier - Elisa

hiv_elisa

HIV Elisa Result

viral_load_elisa

Viral Load Elisa Result

cd4_elisa

CD4 Elisa Result

truvado_drug_level

Truvado drug level Result

hepatitis_b

Hepatitis B Result

creatinine

Creatinine Result

reptrac_symp

Do you have any of the following symptoms? - Reproductive Tract

reptrac_symp_oth

Please provide details on other symptoms

tb_symp

Do you have any of the following symptoms? - TB Screening

tb_num_symp

Calculated Variable: Number of TB Symptoms

tb_refer_doh

Has this participant been referred to the DoH for TB?

hiv_ever_test_result

Have you ever received a test result for HIV?

hiv_pos_test_result

Have you ever had a positive HIV test result?

hiv_on_art

Are you currently receiving ART?

medhis_ask_about

Please ask about Past Medical Histories and select all that apply

medhis_details

Please provide details on other Past Medical Histories

medhis_chronic_meds

Are you currently on Chronic or other Medication?

tb_on_treat_3mths

Have you been on TB Treatment in the past 3 months?

tb_treat_details

Please specify details of TB drugs

allergies_any

Is the participant allergic to anything?

allergies_details

Please provide details on Specific Allergies

rephis_when_last_period

When was your last period?

rephis_num_days_bleed

How many days do you normally bleed?

rephis_num_times_change

How many times do you change your sanitary towel or cup?

rephis_how_often_period

How often do you have your period?

rephis_period_freq_details

Other details on period frequency?

rephis_father_childern

Have you ever fathered any children?

rephis_current_pregnant

Are you currently pregnant?

rephis_ever_pregnant

Have you ever been pregnant?

rephis_age_first_pregnant

How old were you the first time you got pregnant? [age in years]

rephis_times_pregnant

How many times have you been pregnant? (including pregnancies that did not go to

rephis_num_births

How many times have you given birth? (include both live births and stillbirths.

rephis_curr_using_contra

Are you currently using any contraceptive methods to prevent pregnancy?

rephis_curr_contra_meth

Which contraceptive methods are you currently using?

rephis_contra_meth_oth

Other contraceptive method, please specify:

rephis_ever_cirumcised

Have you ever been circumcised?

rephis_ever_hpv_vac

Have you been vaccinated against HPV?

rephis_ever_pap_smear

Have you had your Pap smear?

rephis_pap_smear_result

What was the result?

rephis_pap_last_done

When was the last Pap smear?

sexhis_ever_had_sex

Have you ever had sex?

sexhis_willing_num_part

Are you willing to share the number of different people have you had sex with in

sexhis_num_part_12mths

How many people have you had sex with in the past 12 months (including your husb

sexhis_condomless_sex

Have you had any sex without a condom in the last 3 months? (condom less sex)?

sexhis_know_part_status

Do you know the HIV status of your current sexual partner?

sexhis_part_hiv_status

What is the HIV status of your current sexual partner?

sexhis_gift_for_sex

Did you ever give or were you ever given a gift in order to have sex? It could b

sexhis_part_was_violent

IPV (SASA!) Has your partner/most recent partner done at least one of the follow

sex_violent_to_part

Have you used physical or sexual violence on your partner in the last 12 months?

tab_ever_smoked

In your whole life up to now, have you ever smoked a cigarette?

tab_num_smoke_day

How many cigarettes do you smoke in a day?

alc_ever_drunk

In your whole life up to now, have you ever drunk one "drink" of alcohol (e.g. a

alc_days_one_drink_1mth

How many days have you drunk at least one drink in the past month? [number of da

alc_days_5more_drinks_day

How many days have you drunk 5 or more drinks (in succession) on one or more day

drug_ever_used

Have you used any of these drugs in the past 3 months (Tick all that apply)

drug_oth_details

Please specify more details on the kind of other drugs you have used?

pop_ident_with_which

With which of the following population does the participant identify? (Tick all

Temperature

Temperature (Degrees Celsius)

HeartRate

Record Heart Rate (bpm)

SBPReading1

First BP Reading - Systolic

DBPReading1

First BP Reading - Diastolic

SBPReading2

Second BP Reading - Systolic

DBPReading2

Second BP Reading - Diastolic

SBPFinal

Final BP Reading - Systolic

DBPFinal

Final BP Reading - Diastolic

healpro_disc_diet

Discussing Diet

healpro_disc_excer

Discussing Exercise

healpro_disc_alc

Discussing Alcohol consumption

healpro_disc_mental

Discussing Mental Health Issues

healpro_disc_fertil

Overall fertility advice

healpro_disc_contra

Types of contraception discussed

healpro_couns_safesex

Counseling on Safer Sex Health

healpro_couns_vmmc

Counselling around the benefits of voluntary medical male circumcision (VMMC)

HIVNegResult

Does the participant have a HIV Negative confirmatory test result?

AtRiskHIV

Is the participant at significant risk of acquiring HIV infection?

SexualActive

Is the participant sexually active?

NumSexPartners

With how many different persons did the participants had sex with, 12 months?

UnprotSex12mths

Has the participant had unprotected sex with HIV positive partners or partners w

SexOnDrugAlc

Did the participant ever had sex while under the influence of alcohol and/or dru

WillTakeTablet

Is the participant willing and able to take a tablet everyday?

UseOfCondoms

Does the participant fully understands that the protection provided by PrEP is n

Att3mthVisits

Is the participant willing and able to attend 3 monthly Clinic Visits?

WillUseContra

Is the participant willing to be on contraception during use of PrEP?

ConfirmDetails

Have you checked that you have the correct Contact Details to track the the Par

IsEligible

Is the participant consider Eligible to be initiated on PrEP?

ReasNotEligible

Reason why the participant is NOT consider Eligible to be initiated on PrEP

UptakePrEP

Is the participant going to uptake PrEP?

ReasNotUptakePrEP

Reason whythe participant NOT going to uptake PrEP

PrEP_ConsentDate

Date of informed consent - PrEP Initiation

ic_sp_enough_info1

Received enough information about the study?

ic_sp_ask_questions1

Given an opportunity to ask questions about the study?

ic_sp_cons_study_proc

Agree to take part in this study (PrEP)?

ic_sp_consent_specstor1

Agree to have specimens stored?

ic_sp_agree_contact1

Agree to be contacted by phone?

ic_sp_illiterate

Person is illiterate?

StopedPrEP

Did the participant reported that they stopped taking PrEP?

StopedPrEPStaffCode

Staff Code

StoppedDate

On which date did the participant stop taking PrEP?

ReasNoSex

Reasons for stopping PrEP - Don't have sex currently.

ReasFewPart

Reasons for stopping PrEP - Have fewer partners.

ReasFamObject

Reasons for stopping PrEP - Partner/s or family member/s objected to me taking P

ReasTrustPart

Reasons for stopping PrEP - Trust partner/s or knows their status.

ReasOthPrevS

Reasons for stopping PrEP - Other prevention strategies are sufficient.

ReasDiffEngag

Reasons for stopping PrEP - Finding it difficult to engage with PrEP services.

ReasWorShortSide

Reasons for stopping PrEP - Worried about experiencing short term side effects.

ReasWorLongSide

Reasons for stopping PrEP - Worried about experiencing long term side effects.

ReasNotProtect

Reasons for stopping PrEP - Don't feel adequately protected with PrEP.

ReasDiffDayTab

Reasons for stopping PrEP - Don't want to or finding it difficult to take a dail

ReasPregnant

Reasons for stopping PrEP - Prefer not to take PrEP as pregnant or trying to bec

ReasOther

Reasons for stopping PrEP - Other

ReasOthSpecify

Reasons for stopping PrEP - Other, specify

TakePrEPFutur

Would you be willing to take PrEP again in the future?

sti_treat

Received treatment for - STI

prep_treat

Received treatment for - PrEP

art_treat

Received treatment for - ART

contra_treat

Received treatment for - Contraceptives

oth_treat

Received treatment for - Other

ref_need_referral_doh

Does this participant needs to be referred to a DoH Clinic?

ref_referral_reason

If yes, reason

NextSchDate

Date of Next Scheduled Clinic Visit

AnyAEs

Did the participant reported any side effects or adverse events since the last v

Withdrawal

Participant withdraw at this visit?

WithdrawReas

Reason for Withdrawal - Code

WithdrawReasDesc

Reason for Withdrawal - Description

WithdrawReasOth

Specify other Reason for Withdrawal

DeathDate

Date of Death

DoHTransferDate

Date of Transfer to DoH

Total: 187

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