Treatment as Prevention ANRS 12249 - datasets for Lancet HIV pain paper
South Africa, 2012 - 2016
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Reference ID
ANRS12249TasP.3ie.main.paper
Producer(s)
Dabis, François, Newell, Marie-Louise, Pillay, Deenan
Collections
Metadata
Created on
Jan 30, 2018
Last modified
Feb 02, 2018
Page views
357797
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- Data files
-
HIV Drug
Treatments - Households
- CHEs
-
Lab Test
Results -
ARTemis Lab
Results -
ARTemis
Patients -
CHE Adverse
Events - SCBs SCCs
-
CHE Action
Plans - Clusters
- Visits
- HHIs
- CFUs
- CFU Pill Tests
- Local Areas
- Census Rounds
- SCIs
-
Individual
Consents -
SAEs Initial
Notifications -
SAEs Initial
Notifications -
Events details -
SAEs Initial
Notifications -
Medications -
SAEs
Complementary
Notifications -
SAEs
Complementary
Notifications -
Medications - CBCs
- Specimens
- IQs
-
Minority
Variants - BMQ Surveys
- NGS Genomics
- Refusals
- NgsAssembQuality
- Sample Genomics
- Locations
- LinkToCareTracker
- Exits
-
ACCDB
Encounters -
ACCDB Encounter
Therapies - Individuals
- Trial Statuses
-
DBS results
expanded
Gene (Gene)
Data file: NGS Genomics
Overview
Valid:
1541
Type:
Discrete
Width:
244
Range:
-
Format:
character
Questions and instructions
Categories
| Value | Category | Cases | |
|---|---|---|---|
| POL | 351 |
22.8%
|
|
| full_genome | 710 |
46.1%
|
|
| gag | 1 |
0.1%
|
|
| gag,env,nef | 2 |
0.1%
|
|
| gag,partial_pol | 4 |
0.3%
|
|
| gag,partial_pol,env,nef | 6 |
0.4%
|
|
| gag,partial_pol,vif,vpr | 1 |
0.1%
|
|
| gag,partial_pol,vif,vpr,env,nef | 3 |
0.2%
|
|
| gag,partial_pol,vif,vpr,tat,rev,vpu,env | 1 |
0.1%
|
|
| gag,partial_pol,vif,vpr,tat,rev,vpu,env,nef | 8 |
0.5%
|
|
| gag,partial_pol,vif,vpr,tat,rev,vpu,partial_env,nef | 1 |
0.1%
|
|
| gag,partial_pol,vif,vpr,vpu,env,nef | 1 |
0.1%
|
|
| gag,partial_pol,vpu,env,nef | 1 |
0.1%
|
|
| gag,pol,partial_vif,partial_env,nef | 1 |
0.1%
|
|
| gag,pol,partial_vif,rev,vpu,env,nef | 1 |
0.1%
|
|
| gag,pol,partial_vif,vpr,tat,rev,vpu,env,nef | 1 |
0.1%
|
|
| gag,pol,partial_vif,vpr,vpu,env,nef | 1 |
0.1%
|
|
| gag,pol,partial_vif,vpu,env,nef | 1 |
0.1%
|
|
| gag,pol,vif | 25 |
1.6%
|
|
| gag,pol,vif,partial_vpr,tat,rev,vpu,env,nef | 1 |
0.1%
|
|
| gag,pol,vif,partial_vpr,vpu,env,nef | 1 |
0.1%
|
|
| gag,pol,vif,tat,rev,vpu,env,nef | 1 |
0.1%
|
|
| gag,pol,vif,vpr | 15 |
1%
|
|
| gag,pol,vif,vpr,partial_env | 1 |
0.1%
|
|
| gag,pol,vif,vpr,partial_env,nef | 1 |
0.1%
|
|
| gag,pol,vif,vpr,tat,rev,partial_env,nef | 3 |
0.2%
|
|
| gag,pol,vif,vpr,tat,rev,vpu,env | 3 |
0.2%
|
|
| gag,pol,vif,vpr,tat,rev,vpu,partial_env,nef | 9 |
0.6%
|
|
| gag,pol,vif,vpr,tat,rev,vpu,partial_env,partial_nef | 3 |
0.2%
|
|
| gag,pol,vif,vpr,vpu | 10 |
0.6%
|
|
| gag,pol,vif,vpr,vpu,env,nef | 24 |
1.6%
|
|
| gag,pol,vif,vpr,vpu,partial_env | 3 |
0.2%
|
|
| gag,pol,vif,vpr,vpu,partial_env,nef | 1 |
0.1%
|
|
| partial_gag,partial_pol | 197 |
12.8%
|
|
| partial_gag,pol,vif,vpr,tat,rev,vpu,env,nef | 4 |
0.3%
|
|
| partial_gag,pol,vif,vpr,tat,rev,vpu,partial_env,nef | 1 |
0.1%
|
|
| partial_gag,pol,vif,vpr,vpu | 1 |
0.1%
|
|
| partial_gag,pol,vif,vpr,vpu,env,nef | 4 |
0.3%
|
|
| partial_pol | 122 |
7.9%
|
|
| partial_pol,vif, vpr | 3 |
0.2%
|
|
| pol,vif,vpr | 2 |
0.1%
|
|
| pol,vif,vpr,env,nef | 9 |
0.6%
|
|
| pol,vif,vpr,vpu,env,nef | 2 |
0.1%
|
Warning: these figures indicate the number of cases found in the data file. They cannot be interpreted as summary statistics of the population of interest.