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iGugu_Main_Study_Data_PLOS Medicine

South Africa
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Reference ID
AHRI.iGugu.Main.Study.Data.PLOS.Medicine
Producer(s)
Njabulo Dayi, Dickman Gareta, Nompumelelo Mkwanazi, Shahmanesh M, Francis SC, Baisley K, Mchunu SL, Ferguson J, Smit T, Crucitti T, Dlamini S, Seeley J, Pillay Deenan, McGrath N, Mthiyane TN, ,
Metadata
Documentation in PDF DDI/XML JSON
Created on
Sep 11, 2026
Last modified
Sep 11, 2026
  • Study Description
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  • Identification

    Survey ID number

    AHRI.iGugu.Main.Study.Data.PLOS.Medicine

    Title

    iGugu_Main_Study_Data_PLOS Medicine

    Country
    Name Country code
    South Africa ZA
    Abstract

    Igugu_main_study_data_PLOS Medicine:

    This dataset is the main study data for: Francis SC, Mthiyane TN, Baisley K, Mchunu SL, Ferguson J, Smit T, Crucitti T, Gareta D, Dlamini S, Mutevedzi T, Seeley J, Pillay D, McGrath N, Shahmanesh M. Prevalence of Sexually Transmitted Infections among Young People in South Africa: A Nested Survey in a Health and Demographic Surveillance Site. PLOS Medicine 2017

    In this paper, we report on the results of an acceptability, feasibility and prevalence study of home-based sampling for STI/BV among young men and women aged 15-24 years old in the Africa Health Research Institute (AHRI) health and demographic surveillance site (DSS) in rural KwaZulu-Natal, South Africa. A total of 1342 young people, stratified by age (15-19 and 20-24 years) and sex were selected from the HDSS sampling frame, and 447 were enrolled (70% of those contacted). Participants were interviewed and blood, self-collected urine (men) and vaginal swabs (women) were tested for herpes simplex virus type-2 (HSV-2), chlamydia, gonorrhoea, trichomoniasis, and BV. Further details on study methods are available in the published work. The dataset provided here is the main analytical dataset for the study. It is a de-identified dataset for the 477 study participants, with only the variables necessary to replicate the analysis presented in the paper. To preserve confidentiality, we report ages in 5-yr intervals, all dates are removed, and education has been recoded into 2 categories. A dummy identification number has been added (i.e. not the actual study ID).

    Igugu_study_flow_chart_PLOS Medicine:

    This dataset is a supplementary dataset for: Francis SC, Mthiyane TN, Baisley K, Mchunu SL, Ferguson J, Smit T, Crucitti T, Gareta D, Dlamini S, Mutevedzi T, Seeley J, Pillay D, McGrath N, Shahmanesh M. Prevalence of Sexually Transmitted Infections among Young People in South Africa: A Nested Survey in a Health and Demographic Surveillance Site. PLOS Medicine 2017

    In this paper, we report on the results of an acceptability, feasibility and prevalence study of home-based sampling for STI/BV among young men and women aged 15-24 years old in the Africa Health Research Institute (AHRI) health and demographic surveillance site (HDSS) in rural KwaZulu-Natal, South Africa. A total of 1342 young people, stratified by age (15-19 and 20-24 years) and sex were selected from the HDSS sampling frame, and 447 were enrolled (70% of those contacted). Participants were interviewed and blood, self-collected urine (men) and vaginal swabs (women) were tested for herpes simplex virus type-2 (HSV-2), chlamydia, gonorrhoea, trichomoniasis, and BV. Further details on study methods are available in the published work.

    The dataset provided here is a supplementary dataset containing information on the 1342 young people who were sampled. It is a de-identified dataset with only the variables necessary to replicate the analysis presented in Supplementary Table 1 in the paper. To preserve confidentiality, we report ages in 5-yr intervals, all dates are removed, and education has been recoded into 2 categories. A dummy identification number has been added (i.e. not the actual study ID). The dataset was constructed using information collected in the annual survey of the AHRI HDSS; the survey data and full documentation are available on the AHRI data repository.

    Version

    Version Description

    v1.0.0

    Producers and sponsors

    Primary investigators
    Name Affiliation
    Njabulo Dayi Africa Health Research Institute
    Dickman Gareta Africa Health Research Institute
    Nompumelelo Mkwanazi Africa Health Research Institute
    Shahmanesh M Africa Health Research Institute
    Francis SC Africa Health Research Institute
    Baisley K Africa Health Research Institute
    Mchunu SL Africa Health Research Institute
    Ferguson J Africa Health Research Institute
    Smit T Africa Health Research Institute
    Crucitti T Africa Health Research Institute
    Dlamini S Africa Health Research Institute
    Seeley J Africa Health Research Institute
    Pillay Deenan Africa Health Research Institute
    McGrath N Africa Health Research Institute
    Mthiyane TN Africa Health Research Institute
    Africa Health Research Institute
    Africa Health Research Institute
    Producers
    Name
    Africa Health Research Institute

    Sampling

    Sampling Procedure

    Simple random sample of DSS residents aged 15-24 years, stratified by age group (15-19 and 20-24) and sex

    Data Access

    Access conditions

    Access to the data requires accurate completion of the online data access application form accessible on the AHRI Data repository(https://data.ahri.org/). Data users are required to abide by the data use conditions stipulated on the application for access to the data. Failure to do so may result in their data access privileges being revoked by the Data Custodian. In order to recognise the effort and intellectual contributions of AHRI investigators in producing and curating the data, users of AHRI data must acknowledge the source of the data and abide by the terms and conditions under which the data is accessed and must cite the dataset in publication using the citation provided as part of this documentation. All analytical datasets published on the AHRI Data Repository are assigned digital object identifier (DOIs) and the DOIs can be found on the Data Repository under Study Description tab - Access policy. AHRI data users are required to always cite the dataset using the relevant DOI.

    Citation requirements

    Dayi, N., Gareta, D., Mkwanazi, N., Shahmanesh, M., Francis, S. C., Baisley, K., Mchunu, S. L., Ferguson, J., Smit, T., Crucitti, T., Dlamini, S., Seeley, J., Deenan, P., McGrath, N., & Mthiyane, T. N. (2026). iGugu_Main_Study_Data_PLOS Medicine [Dataset]. Africa Health Research Institute.

    DOI: https://doi.org/10.23664/AHRI.IGUGU.MAIN.STUDY.DATA.PLOS.MEDICINE

    Metadata production

    DDI Document ID

    AHRI.iGugu.Main.Study.Data.PLOS.Medicine

    Producers
    Name Abbreviation
    Africa Health Research Institute AHRI
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